Serveur d'exploration sur la COVID en France

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Performance Assessment of SARS-CoV-2 PCR Assays Developed by WHO Referral Laboratories.

Identifieur interne : 000963 ( Main/Exploration ); précédent : 000962; suivant : 000964

Performance Assessment of SARS-CoV-2 PCR Assays Developed by WHO Referral Laboratories.

Auteurs : Sibyle Etievant [France] ; Antonin Bal [France] ; Vanessa Escuret [France] ; Karen Brengel-Pesce [France] ; Maude Bouscambert [France] ; Valérie Cheynet [France] ; Laurence Generenaz [France] ; Guy Oriol [France] ; Gregory Destras [France] ; Geneviève Billaud [France] ; Laurence Josset [France] ; Emilie Frobert [France] ; Florence Morfin [France] ; Alexandre Gaymard [France]

Source :

RBID : pubmed:32560044

Abstract

A reliable diagnostic assay is crucial to early detect new COVID-19 cases and limit severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission. Since the onset of the COVID-19 pandemic, the World Health Organization has published several diagnostic molecular approaches developed by referral laboratories, including Charité (Germany), HKU (Hong Kong), China CDC (China), US CDC (United States), and Institut Pasteur, Paris (France). We aimed to compare the sensitivity and specificity of these different RT-PCR assays using SARS-CoV-2 cell culture supernatants and clinical respiratory samples. Overall, the different RT-PCR assays performed well for SARS-CoV-2 detection and were all specific except the N Charité (Germany), and N2 US CDC (United States) assays. RdRp Institut Pasteur (IP2, IP4), N China CDC, and N1 US CDC were found to be the most sensitive assays. The data presented herein are of prime importance to facilitate the equipment choice of diagnostic laboratories, as well as for the development of marketed tests.

DOI: 10.3390/jcm9061871
PubMed: 32560044
PubMed Central: PMC7355678


Affiliations:


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Le document en format XML

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<name sortKey="Billaud, Genevieve" sort="Billaud, Genevieve" uniqKey="Billaud G" first="Geneviève" last="Billaud">Geneviève Billaud</name>
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<name sortKey="Josset, Laurence" sort="Josset, Laurence" uniqKey="Josset L" first="Laurence" last="Josset">Laurence Josset</name>
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<name sortKey="Frobert, Emilie" sort="Frobert, Emilie" uniqKey="Frobert E" first="Emilie" last="Frobert">Emilie Frobert</name>
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<name sortKey="Morfin, Florence" sort="Morfin, Florence" uniqKey="Morfin F" first="Florence" last="Morfin">Florence Morfin</name>
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<name sortKey="Gaymard, Alexandre" sort="Gaymard, Alexandre" uniqKey="Gaymard A" first="Alexandre" last="Gaymard">Alexandre Gaymard</name>
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<title level="j">Journal of clinical medicine</title>
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<div type="abstract" xml:lang="en">A reliable diagnostic assay is crucial to early detect new COVID-19 cases and limit severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission. Since the onset of the COVID-19 pandemic, the World Health Organization has published several diagnostic molecular approaches developed by referral laboratories, including Charité (Germany), HKU (Hong Kong), China CDC (China), US CDC (United States), and Institut Pasteur, Paris (France). We aimed to compare the sensitivity and specificity of these different RT-PCR assays using SARS-CoV-2 cell culture supernatants and clinical respiratory samples. Overall, the different RT-PCR assays performed well for SARS-CoV-2 detection and were all specific except the N Charité (Germany), and N2 US CDC (United States) assays. RdRp Institut Pasteur (IP2, IP4), N China CDC, and N1 US CDC were found to be the most sensitive assays. The data presented herein are of prime importance to facilitate the equipment choice of diagnostic laboratories, as well as for the development of marketed tests.</div>
</front>
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<PMID Version="1">32560044</PMID>
<DateRevised>
<Year>2020</Year>
<Month>07</Month>
<Day>24</Day>
</DateRevised>
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<Journal>
<ISSN IssnType="Print">2077-0383</ISSN>
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<Volume>9</Volume>
<Issue>6</Issue>
<PubDate>
<Year>2020</Year>
<Month>Jun</Month>
<Day>16</Day>
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<Title>Journal of clinical medicine</Title>
<ISOAbbreviation>J Clin Med</ISOAbbreviation>
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<ArticleTitle>Performance Assessment of SARS-CoV-2 PCR Assays Developed by WHO Referral Laboratories.</ArticleTitle>
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<Abstract>
<AbstractText>A reliable diagnostic assay is crucial to early detect new COVID-19 cases and limit severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission. Since the onset of the COVID-19 pandemic, the World Health Organization has published several diagnostic molecular approaches developed by referral laboratories, including Charité (Germany), HKU (Hong Kong), China CDC (China), US CDC (United States), and Institut Pasteur, Paris (France). We aimed to compare the sensitivity and specificity of these different RT-PCR assays using SARS-CoV-2 cell culture supernatants and clinical respiratory samples. Overall, the different RT-PCR assays performed well for SARS-CoV-2 detection and were all specific except the N Charité (Germany), and N2 US CDC (United States) assays. RdRp Institut Pasteur (IP2, IP4), N China CDC, and N1 US CDC were found to be the most sensitive assays. The data presented herein are of prime importance to facilitate the equipment choice of diagnostic laboratories, as well as for the development of marketed tests.</AbstractText>
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<LastName>Etievant</LastName>
<ForeName>Sibyle</ForeName>
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<ForeName>Antonin</ForeName>
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<Affiliation>Centre National de Référence des Virus Respiratoires, Hospices Civils de Lyon, Groupement Hospitalier Nord, 69004 Lyon, France.</Affiliation>
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<AffiliationInfo>
<Affiliation>Université de Lyon, Virpath, CIRI, INSERM U1111, CNRS UMR5308, ENS Lyon, Université Claude Bernard Lyon 1, F-69372 Lyon, France.</Affiliation>
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<Citation>Euro Surveill. 2020 Jan;25(3):</Citation>
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<Reference>
<Citation>Euro Surveill. 2020 Feb;25(6):</Citation>
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<ArticleId IdType="pubmed">32046815</ArticleId>
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<Citation>Emerg Infect Dis. 2020 Aug;26(8):1944-1946</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">32433015</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Clin Chem. 2020 Apr 1;66(4):549-555</Citation>
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<ArticleId IdType="pubmed">32031583</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Arch Gesamte Virusforsch. 1970;32(4):389-92</Citation>
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</Reference>
<Reference>
<Citation>Nat Microbiol. 2020 Apr;5(4):536-544</Citation>
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<li>Auvergne-Rhône-Alpes</li>
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<name sortKey="Bal, Antonin" sort="Bal, Antonin" uniqKey="Bal A" first="Antonin" last="Bal">Antonin Bal</name>
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<name sortKey="Escuret, Vanessa" sort="Escuret, Vanessa" uniqKey="Escuret V" first="Vanessa" last="Escuret">Vanessa Escuret</name>
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<name sortKey="Frobert, Emilie" sort="Frobert, Emilie" uniqKey="Frobert E" first="Emilie" last="Frobert">Emilie Frobert</name>
<name sortKey="Frobert, Emilie" sort="Frobert, Emilie" uniqKey="Frobert E" first="Emilie" last="Frobert">Emilie Frobert</name>
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